Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR2P43308 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR2P43308 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR2P43308 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SSR2P43308 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SSR2P43308 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 MIR6722-201ENST00000617286 78 ntBASIC21.61■■□□□ 1.05
SSR2P43308 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.61■■□□□ 1.05
SSR2P43308 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSR2P43308 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.6■■□□□ 1.05
SSR2P43308 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSR2P43308 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SSR2P43308 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SSR2P43308 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.6■■□□□ 1.05
SSR2P43308 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSR2P43308 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.6■■□□□ 1.05
SSR2P43308 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSR2P43308 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SSR2P43308 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SSR2P43308 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.59■■□□□ 1.05
SSR2P43308 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.59■■□□□ 1.05
SSR2P43308 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
SSR2P43308 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SSR2P43308 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSR2P43308 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.59■■□□□ 1.05
SSR2P43308 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.59■■□□□ 1.05
SSR2P43308 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.58■■□□□ 1.05
SSR2P43308 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSR2P43308 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.58■■□□□ 1.05
SSR2P43308 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.58■■□□□ 1.05
SSR2P43308 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSR2P43308 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SSR2P43308 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSR2P43308 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
SSR2P43308 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSR2P43308 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.58■■□□□ 1.04
SSR2P43308 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSR2P43308 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.57■■□□□ 1.04
SSR2P43308 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSR2P43308 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SSR2P43308 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSR2P43308 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSR2P43308 AC005703.6-201ENST00000623265 1329 ntBASIC21.56■■□□□ 1.04
SSR2P43308 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR2P43308 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.56■■□□□ 1.04
SSR2P43308 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.56■■□□□ 1.04
SSR2P43308 AC010997.5-201ENST00000609182 354 ntBASIC21.56■■□□□ 1.04
SSR2P43308 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR2P43308 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR2P43308 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SSR2P43308 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SSR2P43308 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR2P43308 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSR2P43308 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR2P43308 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR2P43308 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.55■■□□□ 1.04
SSR2P43308 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.55■■□□□ 1.04
SSR2P43308 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR2P43308 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.55■■□□□ 1.04
SSR2P43308 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSR2P43308 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSR2P43308 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SSR2P43308 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SSR2P43308 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR2P43308 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR2P43308 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR2P43308 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.54■■□□□ 1.04
SSR2P43308 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SSR2P43308 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.54■■□□□ 1.04
SSR2P43308 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SSR2P43308 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR2P43308 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR2P43308 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR2P43308 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.53■■□□□ 1.04
SSR2P43308 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.53■■□□□ 1.04
SSR2P43308 UNC93B8-201ENST00000511903 705 ntBASIC21.53■■□□□ 1.04
SSR2P43308 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SSR2P43308 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSR2P43308 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSR2P43308 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR2P43308 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.52■■□□□ 1.04
SSR2P43308 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms