Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL1P22362 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL1P22362 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCL1P22362 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCL1P22362 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCL1P22362 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL1P22362 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL1P22362 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCL1P22362 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL1P22362 MIR4508-201ENST00000584178 70 ntBASIC19.59■□□□□ 0.73
CCL1P22362 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCL1P22362 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL1P22362 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.58■□□□□ 0.73
CCL1P22362 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.58■□□□□ 0.73
CCL1P22362 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCL1P22362 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCL1P22362 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.58■□□□□ 0.73
CCL1P22362 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL1P22362 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.58■□□□□ 0.72
CCL1P22362 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCL1P22362 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCL1P22362 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.58■□□□□ 0.72
CCL1P22362 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.58■□□□□ 0.72
CCL1P22362 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCL1P22362 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL1P22362 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.58■□□□□ 0.72
CCL1P22362 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL1P22362 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL1P22362 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL1P22362 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CCL1P22362 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCL1P22362 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCL1P22362 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.57■□□□□ 0.72
CCL1P22362 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.57■□□□□ 0.72
CCL1P22362 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCL1P22362 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CCL1P22362 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCL1P22362 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.56■□□□□ 0.72
CCL1P22362 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL1P22362 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCL1P22362 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCL1P22362 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CCL1P22362 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCL1P22362 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.56■□□□□ 0.72
CCL1P22362 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.56■□□□□ 0.72
CCL1P22362 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.56■□□□□ 0.72
CCL1P22362 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.56■□□□□ 0.72
CCL1P22362 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL1P22362 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.56■□□□□ 0.72
CCL1P22362 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL1P22362 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCL1P22362 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL1P22362 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCL1P22362 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCL1P22362 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL1P22362 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL1P22362 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.55■□□□□ 0.72
CCL1P22362 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL1P22362 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.54■□□□□ 0.72
CCL1P22362 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCL1P22362 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.54■□□□□ 0.72
CCL1P22362 AC012354.3-201ENST00000623734 483 ntBASIC19.54■□□□□ 0.72
CCL1P22362 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.54■□□□□ 0.72
CCL1P22362 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCL1P22362 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.54■□□□□ 0.72
CCL1P22362 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.54■□□□□ 0.72
CCL1P22362 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL1P22362 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCL1P22362 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL1P22362 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL1P22362 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.53■□□□□ 0.72
CCL1P22362 AL117328.2-201ENST00000624617 1940 ntBASIC19.53■□□□□ 0.72
CCL1P22362 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.53■□□□□ 0.72
CCL1P22362 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.53■□□□□ 0.72
CCL1P22362 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL1P22362 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCL1P22362 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.53■□□□□ 0.72
CCL1P22362 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCL1P22362 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.53■□□□□ 0.72
CCL1P22362 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCL1P22362 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCL1P22362 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.52■□□□□ 0.72
CCL1P22362 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.52■□□□□ 0.72
CCL1P22362 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL1P22362 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms