Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF728P0DKX0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF728P0DKX0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF728P0DKX0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
ZNF728P0DKX0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF728P0DKX0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF728P0DKX0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 AC103724.3-201ENST00000564481 992 ntBASIC19.2■□□□□ 0.66
ZNF728P0DKX0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZNF728P0DKX0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF728P0DKX0 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF728P0DKX0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF728P0DKX0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF728P0DKX0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF728P0DKX0 PKD1P6-201ENST00000343738 4769 ntBASIC19.19■□□□□ 0.66
ZNF728P0DKX0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF728P0DKX0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF728P0DKX0 AL117328.2-201ENST00000624617 1940 ntBASIC19.17■□□□□ 0.66
ZNF728P0DKX0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 RARRES2P1-201ENST00000474487 481 ntBASIC19.17■□□□□ 0.66
ZNF728P0DKX0 AL031848.2-201ENST00000607670 837 ntBASIC19.17■□□□□ 0.66
ZNF728P0DKX0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF728P0DKX0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF728P0DKX0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF728P0DKX0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.14■□□□□ 0.66
ZNF728P0DKX0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF728P0DKX0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF728P0DKX0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZNF728P0DKX0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms