Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CSF1P09603 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.5■□□□□ 0.71
CSF1P09603 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.5■□□□□ 0.71
CSF1P09603 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.5■□□□□ 0.71
CSF1P09603 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSF1P09603 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CSF1P09603 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSF1P09603 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.49■□□□□ 0.71
CSF1P09603 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CSF1P09603 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.49■□□□□ 0.71
CSF1P09603 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSF1P09603 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSF1P09603 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CSF1P09603 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSF1P09603 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.48■□□□□ 0.71
CSF1P09603 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CSF1P09603 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.48■□□□□ 0.71
CSF1P09603 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.48■□□□□ 0.71
CSF1P09603 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.48■□□□□ 0.71
CSF1P09603 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.48■□□□□ 0.71
CSF1P09603 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
CSF1P09603 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.48■□□□□ 0.71
CSF1P09603 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSF1P09603 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSF1P09603 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CSF1P09603 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.47■□□□□ 0.71
CSF1P09603 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
CSF1P09603 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.47■□□□□ 0.71
CSF1P09603 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSF1P09603 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CSF1P09603 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.46■□□□□ 0.71
CSF1P09603 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CSF1P09603 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.46■□□□□ 0.71
CSF1P09603 MIR3960-201ENST00000583311 91 ntBASIC19.46■□□□□ 0.71
CSF1P09603 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.46■□□□□ 0.71
CSF1P09603 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.46■□□□□ 0.71
CSF1P09603 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSF1P09603 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.46■□□□□ 0.71
CSF1P09603 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CSF1P09603 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CSF1P09603 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.46■□□□□ 0.71
CSF1P09603 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 FOXO3B-201ENST00000395675 1928 ntBASIC19.45■□□□□ 0.7
CSF1P09603 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.45■□□□□ 0.7
CSF1P09603 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.45■□□□□ 0.7
CSF1P09603 AC007029.1-201ENST00000604183 313 ntBASIC19.45■□□□□ 0.7
CSF1P09603 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.45■□□□□ 0.7
CSF1P09603 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSF1P09603 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.45■□□□□ 0.7
CSF1P09603 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CSF1P09603 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSF1P09603 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
CSF1P09603 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CSF1P09603 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSF1P09603 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSF1P09603 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.44■□□□□ 0.7
CSF1P09603 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSF1P09603 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.44■□□□□ 0.7
CSF1P09603 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSF1P09603 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSF1P09603 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CSF1P09603 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSF1P09603 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms