Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
CHGBP05060 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHGBP05060 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHGBP05060 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHGBP05060 AC005703.6-201ENST00000623265 1329 ntBASIC27.44■■□□□ 1.98
CHGBP05060 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHGBP05060 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CHGBP05060 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHGBP05060 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHGBP05060 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHGBP05060 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHGBP05060 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
CHGBP05060 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CHGBP05060 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CHGBP05060 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
CHGBP05060 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.43■■□□□ 1.98
CHGBP05060 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
CHGBP05060 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.43■■□□□ 1.98
CHGBP05060 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHGBP05060 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHGBP05060 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CHGBP05060 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
CHGBP05060 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.42■■□□□ 1.98
CHGBP05060 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.42■■□□□ 1.98
CHGBP05060 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.42■■□□□ 1.98
CHGBP05060 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHGBP05060 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.41■■□□□ 1.98
CHGBP05060 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHGBP05060 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHGBP05060 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.41■■□□□ 1.98
CHGBP05060 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHGBP05060 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.41■■□□□ 1.98
CHGBP05060 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHGBP05060 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHGBP05060 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHGBP05060 AL356740.2-201ENST00000601559 647 ntBASIC27.4■■□□□ 1.98
CHGBP05060 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHGBP05060 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHGBP05060 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CHGBP05060 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHGBP05060 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.4■■□□□ 1.98
CHGBP05060 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHGBP05060 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.39■■□□□ 1.98
CHGBP05060 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHGBP05060 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHGBP05060 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHGBP05060 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHGBP05060 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CHGBP05060 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHGBP05060 AC009102.2-201ENST00000606772 1639 ntBASIC27.38■■□□□ 1.97
CHGBP05060 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHGBP05060 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.38■■□□□ 1.97
CHGBP05060 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHGBP05060 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.38■■□□□ 1.97
CHGBP05060 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.38■■□□□ 1.97
CHGBP05060 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.38■■□□□ 1.97
CHGBP05060 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHGBP05060 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.38■■□□□ 1.97
CHGBP05060 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHGBP05060 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
CHGBP05060 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHGBP05060 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHGBP05060 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.37■■□□□ 1.97
CHGBP05060 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.37■■□□□ 1.97
CHGBP05060 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHGBP05060 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.36■■□□□ 1.97
CHGBP05060 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.36■■□□□ 1.97
CHGBP05060 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHGBP05060 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CHGBP05060 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHGBP05060 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHGBP05060 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHGBP05060 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHGBP05060 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CHGBP05060 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.35■■□□□ 1.97
CHGBP05060 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CHGBP05060 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.35■■□□□ 1.97
CHGBP05060 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHGBP05060 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.35■■□□□ 1.97
CHGBP05060 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.35■■□□□ 1.97
CHGBP05060 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.35■■□□□ 1.97
CHGBP05060 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CHGBP05060 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHGBP05060 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.34■■□□□ 1.97
CHGBP05060 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.34■■□□□ 1.97
CHGBP05060 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CHGBP05060 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms