Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.66■□□□□ 0.74
NGFP01138 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NGFP01138 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NGFP01138 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NGFP01138 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NGFP01138 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.66■□□□□ 0.74
NGFP01138 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NGFP01138 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NGFP01138 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NGFP01138 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NGFP01138 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NGFP01138 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.65■□□□□ 0.74
NGFP01138 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NGFP01138 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NGFP01138 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NGFP01138 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.64■□□□□ 0.73
NGFP01138 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NGFP01138 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.64■□□□□ 0.73
NGFP01138 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NGFP01138 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NGFP01138 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.64■□□□□ 0.73
NGFP01138 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NGFP01138 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NGFP01138 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.64■□□□□ 0.73
NGFP01138 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NGFP01138 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NGFP01138 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.64■□□□□ 0.73
NGFP01138 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NGFP01138 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NGFP01138 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NGFP01138 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NGFP01138 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.63■□□□□ 0.73
NGFP01138 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.63■□□□□ 0.73
NGFP01138 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.63■□□□□ 0.73
NGFP01138 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NGFP01138 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.63■□□□□ 0.73
NGFP01138 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.63■□□□□ 0.73
NGFP01138 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.63■□□□□ 0.73
NGFP01138 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NGFP01138 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.63■□□□□ 0.73
NGFP01138 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NGFP01138 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NGFP01138 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NGFP01138 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
NGFP01138 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NGFP01138 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NGFP01138 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NGFP01138 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.62■□□□□ 0.73
NGFP01138 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 KRT16P3-201ENST00000439127 1283 ntBASIC19.62■□□□□ 0.73
NGFP01138 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.62■□□□□ 0.73
NGFP01138 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.62■□□□□ 0.73
NGFP01138 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NGFP01138 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.62■□□□□ 0.73
NGFP01138 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NGFP01138 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.61■□□□□ 0.73
NGFP01138 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NGFP01138 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NGFP01138 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NGFP01138 AC005703.6-201ENST00000623265 1329 ntBASIC19.61■□□□□ 0.73
NGFP01138 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
NGFP01138 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.61■□□□□ 0.73
NGFP01138 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NGFP01138 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NGFP01138 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.6■□□□□ 0.73
NGFP01138 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.6■□□□□ 0.73
NGFP01138 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.6■□□□□ 0.73
NGFP01138 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NGFP01138 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NGFP01138 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NGFP01138 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NGFP01138 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NGFP01138 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NGFP01138 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NGFP01138 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NGFP01138 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
NGFP01138 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NGFP01138 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NGFP01138 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NGFP01138 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NGFP01138 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NGFP01138 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.58■□□□□ 0.72
NGFP01138 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NGFP01138 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NGFP01138 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
NGFP01138 MIR6724-1-201ENST00000616420 92 ntBASIC19.58■□□□□ 0.72
NGFP01138 MIR6724-2-201ENST00000616483 92 ntBASIC19.58■□□□□ 0.72
NGFP01138 MIR6724-4-201ENST00000617390 92 ntBASIC19.58■□□□□ 0.72
NGFP01138 MIR6724-3-201ENST00000622482 92 ntBASIC19.58■□□□□ 0.72
NGFP01138 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NGFP01138 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.57■□□□□ 0.72
NGFP01138 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NGFP01138 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NGFP01138 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NGFP01138 AL356441.2-201ENST00000443009 864 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms