Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCN1O60741 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.09■□□□□ 0.97
HCN1O60741 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCN1O60741 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HCN1O60741 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCN1O60741 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCN1O60741 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCN1O60741 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCN1O60741 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
HCN1O60741 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.08■□□□□ 0.97
HCN1O60741 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.08■□□□□ 0.97
HCN1O60741 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCN1O60741 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCN1O60741 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCN1O60741 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
HCN1O60741 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HCN1O60741 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
HCN1O60741 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCN1O60741 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.07■□□□□ 0.96
HCN1O60741 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HCN1O60741 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HCN1O60741 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HCN1O60741 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.06■□□□□ 0.96
HCN1O60741 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCN1O60741 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HCN1O60741 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.06■□□□□ 0.96
HCN1O60741 MIR6724-1-201ENST00000616420 92 ntBASIC21.06■□□□□ 0.96
HCN1O60741 MIR6724-2-201ENST00000616483 92 ntBASIC21.06■□□□□ 0.96
HCN1O60741 MIR6724-4-201ENST00000617390 92 ntBASIC21.06■□□□□ 0.96
HCN1O60741 MIR6724-3-201ENST00000622482 92 ntBASIC21.06■□□□□ 0.96
HCN1O60741 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCN1O60741 AC008406.3-201ENST00000620001 1374 ntBASIC21.06■□□□□ 0.96
HCN1O60741 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HCN1O60741 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.05■□□□□ 0.96
HCN1O60741 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.05■□□□□ 0.96
HCN1O60741 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.05■□□□□ 0.96
HCN1O60741 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.05■□□□□ 0.96
HCN1O60741 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HCN1O60741 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCN1O60741 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCN1O60741 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HCN1O60741 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCN1O60741 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCN1O60741 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
HCN1O60741 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
HCN1O60741 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCN1O60741 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HCN1O60741 CLDN5-201ENST00000403084 2357 ntBASIC21.04■□□□□ 0.96
HCN1O60741 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.04■□□□□ 0.96
HCN1O60741 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HCN1O60741 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.03■□□□□ 0.96
HCN1O60741 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCN1O60741 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.03■□□□□ 0.96
HCN1O60741 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.03■□□□□ 0.96
HCN1O60741 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.03■□□□□ 0.96
HCN1O60741 ABCB10P4-201ENST00000566803 2184 ntBASIC21.03■□□□□ 0.96
HCN1O60741 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HCN1O60741 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCN1O60741 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HCN1O60741 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCN1O60741 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.02■□□□□ 0.96
HCN1O60741 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCN1O60741 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HCN1O60741 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HCN1O60741 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.02■□□□□ 0.96
HCN1O60741 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.02■□□□□ 0.96
HCN1O60741 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
HCN1O60741 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HCN1O60741 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCN1O60741 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCN1O60741 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.01■□□□□ 0.95
HCN1O60741 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.01■□□□□ 0.95
HCN1O60741 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.01■□□□□ 0.95
HCN1O60741 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.01■□□□□ 0.95
HCN1O60741 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.01■□□□□ 0.95
HCN1O60741 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCN1O60741 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCN1O60741 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21■□□□□ 0.95
HCN1O60741 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21■□□□□ 0.95
HCN1O60741 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21■□□□□ 0.95
HCN1O60741 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HCN1O60741 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCN1O60741 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCN1O60741 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HCN1O60741 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms