Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
XRCC2O43543 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.64■□□□□ 0.73
XRCC2O43543 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XRCC2O43543 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
XRCC2O43543 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XRCC2O43543 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.64■□□□□ 0.73
XRCC2O43543 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
XRCC2O43543 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
XRCC2O43543 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
XRCC2O43543 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
XRCC2O43543 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
XRCC2O43543 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.63■□□□□ 0.73
XRCC2O43543 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 SNX5-217ENST00000606557 1087 ntBASIC19.63■□□□□ 0.73
XRCC2O43543 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.63■□□□□ 0.73
XRCC2O43543 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRCC2O43543 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRCC2O43543 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRCC2O43543 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRCC2O43543 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.62■□□□□ 0.73
XRCC2O43543 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRCC2O43543 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
XRCC2O43543 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRCC2O43543 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.61■□□□□ 0.73
XRCC2O43543 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.61■□□□□ 0.73
XRCC2O43543 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.61■□□□□ 0.73
XRCC2O43543 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
XRCC2O43543 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.61■□□□□ 0.73
XRCC2O43543 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.61■□□□□ 0.73
XRCC2O43543 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.61■□□□□ 0.73
XRCC2O43543 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
XRCC2O43543 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.61■□□□□ 0.73
XRCC2O43543 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC2O43543 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
XRCC2O43543 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 AC021242.3-201ENST00000607598 1377 ntBASIC19.6■□□□□ 0.73
XRCC2O43543 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC2O43543 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
XRCC2O43543 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC2O43543 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC2O43543 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC2O43543 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.59■□□□□ 0.73
XRCC2O43543 AC092068.2-201ENST00000590491 1708 ntBASIC19.59■□□□□ 0.73
XRCC2O43543 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
XRCC2O43543 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC2O43543 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC2O43543 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC2O43543 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC2O43543 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
XRCC2O43543 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.59■□□□□ 0.73
XRCC2O43543 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC2O43543 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC2O43543 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.59■□□□□ 0.73
XRCC2O43543 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
XRCC2O43543 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC2O43543 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC2O43543 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC2O43543 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.58■□□□□ 0.73
XRCC2O43543 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC2O43543 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
XRCC2O43543 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC2O43543 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC2O43543 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC2O43543 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.58■□□□□ 0.73
XRCC2O43543 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC2O43543 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC2O43543 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.58■□□□□ 0.72
XRCC2O43543 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC2O43543 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.58■□□□□ 0.72
XRCC2O43543 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
XRCC2O43543 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
XRCC2O43543 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
XRCC2O43543 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.58■□□□□ 0.72
XRCC2O43543 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC2O43543 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms