Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 AL121603.2-201ENST00000557373 2117 ntBASIC14.38□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 AL359504.2-201ENST00000605506 1601 ntBASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ESRRAP2-201ENST00000418437 1549 ntBASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 CAHM-201ENST00000604200 896 ntBASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms