Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
A0A1W2PRF3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
A0A1W2PRF3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
A0A1W2PRF3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.56■□□□□ 0.56
A0A1W2PRF3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.56■□□□□ 0.56
A0A1W2PRF3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
A0A1W2PRF3 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.55■□□□□ 0.56
A0A1W2PRF3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.55■□□□□ 0.56
A0A1W2PRF3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.55■□□□□ 0.56
A0A1W2PRF3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.55■□□□□ 0.56
A0A1W2PRF3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.55■□□□□ 0.56
A0A1W2PRF3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
A0A1W2PRF3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.54■□□□□ 0.56
A0A1W2PRF3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 AL512631.2-201ENST00000604634 923 ntBASIC18.54■□□□□ 0.56
A0A1W2PRF3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
A0A1W2PRF3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
A0A1W2PRF3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
A0A1W2PRF3 ALDH1A3-203ENST00000557963 1670 ntBASIC18.54■□□□□ 0.56
A0A1W2PRF3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
A0A1W2PRF3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
A0A1W2PRF3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
A0A1W2PRF3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
A0A1W2PRF3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
A0A1W2PRF3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
A0A1W2PRF3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
A0A1W2PRF3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
A0A1W2PRF3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
A0A1W2PRF3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
A0A1W2PRF3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.52■□□□□ 0.56
A0A1W2PRF3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
A0A1W2PRF3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
A0A1W2PRF3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
A0A1W2PRF3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
A0A1W2PRF3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
A0A1W2PRF3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
A0A1W2PRF3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
A0A1W2PRF3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.51■□□□□ 0.55
A0A1W2PRF3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.51■□□□□ 0.55
A0A1W2PRF3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
A0A1W2PRF3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
A0A1W2PRF3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
A0A1W2PRF3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 AL161729.1-201ENST00000604104 1402 ntBASIC18.5■□□□□ 0.55
A0A1W2PRF3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
A0A1W2PRF3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.5■□□□□ 0.55
A0A1W2PRF3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.5■□□□□ 0.55
A0A1W2PRF3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.5■□□□□ 0.55
A0A1W2PRF3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.5■□□□□ 0.55
A0A1W2PRF3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.5■□□□□ 0.55
A0A1W2PRF3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
A0A1W2PRF3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.5■□□□□ 0.55
A0A1W2PRF3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
A0A1W2PRF3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms