Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 AC019171.1-201ENST00000601251 1056 ntBASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.96■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AL117328.2-201ENST00000624617 1940 ntBASIC15.96■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AC022616.5-201ENST00000518796 181 ntBASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 LONRF2P2-201ENST00000439212 571 ntBASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 AL592295.1-201ENST00000400984 884 ntBASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms