Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 FAM90A2P-201ENST00000511144 1395 ntBASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 FAM90A25P-201ENST00000528404 1395 ntBASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AC073150.1-201ENST00000450406 1084 ntBASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AC008267.1-201ENST00000474858 1069 ntBASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AC136759.1-202ENST00000530858 2194 ntBASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AL645933.1-201ENST00000440087 609 ntBASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 MIR3188-201ENST00000583494 85 ntBASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 FRMPD2B-201ENST00000431305 1347 ntBASIC15.66■□□□□ 0.1
SSX2IPQ9Y2D8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms