Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AL590627.1-203ENST00000421194 1026 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC005237.2-201ENST00000434368 219 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 RWDD4P1-201ENST00000488019 565 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 KRT126P-201ENST00000549467 1181 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC000095.1-201ENST00000603208 874 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 LINC00628-201ENST00000628516 1289 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AF228730.6-201ENST00000641497 218 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC084121.3-201ENST00000641716 218 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 AC022497.1-201ENST00000624916 3691 ntBASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SSBP4Q9BWG4 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 FAM58DP-201ENST00000428076 619 ntBASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.1□□□□□ -0.63
SSBP4Q9BWG4 TPM4P1-201ENST00000436100 807 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms