Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 KRT18P64-201ENST00000434946 1219 ntBASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 RNA5SP415-201ENST00000517246 115 ntBASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 AC112191.1-201ENST00000523689 701 ntBASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 AC110048.1-201ENST00000604293 2157 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 SPDYE17-201ENST00000412399 783 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 AC003958.1-201ENST00000435883 421 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 AC079776.4-201ENST00000511039 504 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 AC106730.1-201ENST00000566722 1090 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 AC099522.2-201ENST00000607001 744 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB3IPQ96QF0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms