Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 KRT8P28-201ENST00000433288 1390 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 VENTXP1-201ENST00000569334 2716 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
APH1BQ8WW43 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.15□□□□□ -0.31
APH1BQ8WW43 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.15□□□□□ -0.31
APH1BQ8WW43 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 PCDHB19P-202ENST00000625133 2914 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 ARSEP1-201ENST00000420443 635 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AK2P2-201ENST00000439142 405 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AC027237.1-201ENST00000560942 655 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AL590560.3-201ENST00000623350 461 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 Z92544.3-201ENST00000624747 417 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 AC060814.4-201ENST00000594169 2163 ntBASIC13.14□□□□□ -0.31
APH1BQ8WW43 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APH1BQ8WW43 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
APH1BQ8WW43 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.13□□□□□ -0.31
APH1BQ8WW43 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 TSSK5P-201ENST00000423978 907 ntBASIC13.13□□□□□ -0.31
APH1BQ8WW43 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 HLA-J-203ENST00000494367 1087 ntBASIC13.13□□□□□ -0.31
APH1BQ8WW43 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms