Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AC011498.7-201ENST00000624986 2027 ntBASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 CTBP2P5-201ENST00000454986 1264 ntBASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AL512343.1-201ENST00000605837 169 ntBASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TTC9CQ8N5M4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AC005840.4-201ENST00000541242 2494 ntBASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AC005586.2-201ENST00000563946 837 ntBASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TTC9CQ8N5M4 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms