Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 KRT18P36-201ENST00000411618 1276 ntBASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 AL592076.1-201ENST00000424448 303 ntBASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 AC027139.1-201ENST00000565286 951 ntBASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 MIR3180-2-201ENST00000581748 88 ntBASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 AC133540.1-201ENST00000620845 1019 ntBASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 AL118508.1-201ENST00000613502 2345 ntBASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RP1L1Q8IWN7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 HLA-DMA-203ENST00000395305 777 ntBASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 DPY19L2P5-201ENST00000456300 331 ntBASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 AC100827.2-201ENST00000563214 1194 ntBASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 AL109837.1-201ENST00000603272 613 ntBASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 Z69890.1-201ENST00000382990 339 ntBASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
RP1L1Q8IWN7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 AL109809.1-201ENST00000418979 1367 ntBASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.21□□□□□ -0.3
RP1L1Q8IWN7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 BANF1P3-201ENST00000412556 261 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AL157407.1-201ENST00000435784 904 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms