Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.31■□□□□ 0.2
HS1BP3Q53T59 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 LINC01165-201ENST00000445190 1623 ntBASIC16.3■□□□□ 0.2
HS1BP3Q53T59 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 AC018445.4-201ENST00000624066 2291 ntBASIC16.3■□□□□ 0.2
HS1BP3Q53T59 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.3■□□□□ 0.2
HS1BP3Q53T59 AL121723.1-201ENST00000445194 1519 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 KRT18P64-201ENST00000434946 1219 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AC009955.4-201ENST00000597192 544 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AF228730.6-201ENST00000641497 218 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AC084121.3-201ENST00000641716 218 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 AC105233.6-201ENST00000642093 218 ntBASIC16.29■□□□□ 0.2
HS1BP3Q53T59 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS1BP3Q53T59 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms