Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
AP1S1P61966 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.59□□□□□ -0.07
AP1S1P61966 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.59□□□□□ -0.07
AP1S1P61966 MIR3188-201ENST00000583494 85 ntBASIC14.59□□□□□ -0.07
AP1S1P61966 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 AC152010.1-201ENST00000415779 2006 ntBASIC14.59□□□□□ -0.07
AP1S1P61966 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 AC012617.1-204ENST00000586340 2305 ntBASIC14.59□□□□□ -0.07
AP1S1P61966 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
AP1S1P61966 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.58□□□□□ -0.07
AP1S1P61966 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.58□□□□□ -0.07
AP1S1P61966 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.58□□□□□ -0.07
AP1S1P61966 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
AP1S1P61966 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S1P61966 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 HSPA8P5-201ENST00000456928 2069 ntBASIC14.58□□□□□ -0.08
AP1S1P61966 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.58□□□□□ -0.08
AP1S1P61966 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
AP1S1P61966 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
AP1S1P61966 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 TSPY25P-201ENST00000429463 745 ntBASIC14.58□□□□□ -0.08
AP1S1P61966 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 HIST2H2BC-201ENST00000498492 580 ntBASIC14.58□□□□□ -0.08
AP1S1P61966 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.58□□□□□ -0.08
AP1S1P61966 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.58□□□□□ -0.08
AP1S1P61966 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.58□□□□□ -0.08
AP1S1P61966 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 AC091544.8-201ENST00000619490 361 ntBASIC14.58□□□□□ -0.08
AP1S1P61966 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 TUBB8P4-201ENST00000511806 1324 ntBASIC14.58□□□□□ -0.08
AP1S1P61966 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
AP1S1P61966 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 AL157791.1-201ENST00000553667 1699 ntBASIC14.58□□□□□ -0.08
AP1S1P61966 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S1P61966 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S1P61966 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
AP1S1P61966 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
AP1S1P61966 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S1P61966 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S1P61966 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms