Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 FAAHP1-202ENST00000446499 1238 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AL139010.1-201ENST00000454878 894 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SAMD11P1-201ENST00000571429 661 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AC018645.3-201ENST00000628855 2646 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AL590440.2-201ENST00000641973 1595 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 AL645728.2-201ENST00000641974 660 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ALK-205ENST00000618119 4646 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 NT5C3AP1-202ENST00000441170 1663 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 REXO1L1P-201ENST00000379010 6598 ntBASIC10.88□□□□□ -0.67
HIST1H2BDP58876 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HIST1H2BDP58876 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.87□□□□□ -0.67
HIST1H2BDP58876 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AL137783.1-201ENST00000623494 1896 ntBASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 APTR-205ENST00000447009 902 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 TOB2P1-201ENST00000469761 992 ntBASIC10.87□□□□□ -0.67
HIST1H2BDP58876 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AC080013.1-204ENST00000607426 2185 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms