Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC051619.9-201ENST00000623237 597 ntBASIC14.14□□□□□ -0.15
PDX1P52945 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.14□□□□□ -0.15
PDX1P52945 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PDX1P52945 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PDX1P52945 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.14□□□□□ -0.15
PDX1P52945 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 SALL4P5-201ENST00000419001 1760 ntBASIC14.14□□□□□ -0.15
PDX1P52945 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.14□□□□□ -0.15
PDX1P52945 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.14□□□□□ -0.15
PDX1P52945 AC144522.1-201ENST00000625111 1658 ntBASIC14.14□□□□□ -0.15
PDX1P52945 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDX1P52945 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDX1P52945 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDX1P52945 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 AC140479.7-201ENST00000636301 2332 ntBASIC14.13□□□□□ -0.15
PDX1P52945 CAP2P1-201ENST00000557743 1390 ntBASIC14.13□□□□□ -0.15
PDX1P52945 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDX1P52945 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.13□□□□□ -0.15
PDX1P52945 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.13□□□□□ -0.15
PDX1P52945 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.13□□□□□ -0.15
PDX1P52945 RN7SL258P-201ENST00000478664 300 ntBASIC14.13□□□□□ -0.15
PDX1P52945 RN7SL67P-201ENST00000492147 296 ntBASIC14.13□□□□□ -0.15
PDX1P52945 POU5F1P2-201ENST00000521750 823 ntBASIC14.13□□□□□ -0.15
PDX1P52945 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 RN7SL736P-201ENST00000613111 269 ntBASIC14.13□□□□□ -0.15
PDX1P52945 COX6A1P2-201ENST00000620597 330 ntBASIC14.13□□□□□ -0.15
PDX1P52945 AC027601.3-201ENST00000622907 509 ntBASIC14.13□□□□□ -0.15
PDX1P52945 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
PDX1P52945 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDX1P52945 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDX1P52945 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 INTS4P1-203ENST00000641008 3683 ntBASIC14.12□□□□□ -0.15
PDX1P52945 AC018442.1-201ENST00000421439 2061 ntBASIC14.12□□□□□ -0.15
PDX1P52945 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.12□□□□□ -0.15
PDX1P52945 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.12□□□□□ -0.15
PDX1P52945 RPSAP31-201ENST00000416648 895 ntBASIC14.12□□□□□ -0.15
PDX1P52945 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms