Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
EFNA4P52798 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 Z69890.1-201ENST00000382990 339 ntBASIC12.14□□□□□ -0.47
EFNA4P52798 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 AC073869.2-201ENST00000417338 1026 ntBASIC12.14□□□□□ -0.47
EFNA4P52798 AC092580.1-201ENST00000433998 658 ntBASIC12.14□□□□□ -0.47
EFNA4P52798 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 NDUFS6P1-201ENST00000485187 316 ntBASIC12.14□□□□□ -0.47
EFNA4P52798 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.14□□□□□ -0.47
EFNA4P52798 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.14□□□□□ -0.47
EFNA4P52798 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.14□□□□□ -0.47
EFNA4P52798 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
EFNA4P52798 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.14□□□□□ -0.47
EFNA4P52798 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.14□□□□□ -0.47
EFNA4P52798 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.14□□□□□ -0.47
EFNA4P52798 MIR6842-201ENST00000612539 65 ntBASIC12.14□□□□□ -0.47
EFNA4P52798 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
EFNA4P52798 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.14□□□□□ -0.47
EFNA4P52798 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 AC013268.4-201ENST00000637413 2228 ntBASIC12.14□□□□□ -0.47
EFNA4P52798 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
EFNA4P52798 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.13□□□□□ -0.47
EFNA4P52798 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.13□□□□□ -0.47
EFNA4P52798 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.13□□□□□ -0.47
EFNA4P52798 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
EFNA4P52798 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.13□□□□□ -0.47
EFNA4P52798 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.13□□□□□ -0.47
EFNA4P52798 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.13□□□□□ -0.47
EFNA4P52798 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
EFNA4P52798 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.13□□□□□ -0.47
EFNA4P52798 ORAOV1P1-201ENST00000503108 395 ntBASIC12.13□□□□□ -0.47
EFNA4P52798 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.13□□□□□ -0.47
EFNA4P52798 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.13□□□□□ -0.47
EFNA4P52798 AC138701.2-201ENST00000553634 226 ntBASIC12.13□□□□□ -0.47
EFNA4P52798 SORD2P-201ENST00000558556 1069 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms