Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 FAM86LP-201ENST00000478302 853 ntBASIC9.89□□□□□ -0.83
CXCL5P42830 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
CXCL5P42830 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 AC027369.6-201ENST00000525520 931 ntBASIC9.89□□□□□ -0.83
CXCL5P42830 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC9.89□□□□□ -0.83
CXCL5P42830 VPS29-207ENST00000549970 818 ntTSL 3 BASIC9.89□□□□□ -0.83
CXCL5P42830 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC9.89□□□□□ -0.83
CXCL5P42830 AC140878.1-201ENST00000565277 250 ntBASIC9.89□□□□□ -0.83
CXCL5P42830 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CXCL5P42830 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC9.89□□□□□ -0.83
CXCL5P42830 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC9.89□□□□□ -0.83
CXCL5P42830 AL049840.4-201ENST00000602422 811 ntBASIC9.89□□□□□ -0.83
CXCL5P42830 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 AC007431.3-201ENST00000623221 587 ntBASIC9.89□□□□□ -0.83
CXCL5P42830 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CXCL5P42830 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC9.89□□□□□ -0.83
CXCL5P42830 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
CXCL5P42830 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CXCL5P42830 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CXCL5P42830 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CXCL5P42830 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.89□□□□□ -0.83
CXCL5P42830 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 AC114271.1-201ENST00000612689 2813 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CXCL5P42830 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CXCL5P42830 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 HPD-204ENST00000543163 1709 ntTSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 HNRNPA3P1-201ENST00000401429 1139 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 AC107890.1-201ENST00000422478 521 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 CNN2P11-201ENST00000429351 262 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.88□□□□□ -0.83
CXCL5P42830 KLF2P3-201ENST00000451977 1087 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 HNRNPA3P5-201ENST00000455201 833 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC9.88□□□□□ -0.83
CXCL5P42830 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC9.88□□□□□ -0.83
CXCL5P42830 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CXCL5P42830 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC9.88□□□□□ -0.83
CXCL5P42830 AC025678.2-201ENST00000562061 970 ntBASIC9.88□□□□□ -0.83
CXCL5P42830 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC9.88□□□□□ -0.83
CXCL5P42830 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC9.88□□□□□ -0.83
CXCL5P42830 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms