Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 CICP16-201ENST00000502609 2813 ntBASIC16.18■□□□□ 0.18
CYP3A4P08684 AC015656.1-201ENST00000624209 3578 ntBASIC16.18■□□□□ 0.18
CYP3A4P08684 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.18■□□□□ 0.18
CYP3A4P08684 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.18■□□□□ 0.18
CYP3A4P08684 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.18■□□□□ 0.18
CYP3A4P08684 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.18■□□□□ 0.18
CYP3A4P08684 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.18■□□□□ 0.18
CYP3A4P08684 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.18■□□□□ 0.18
CYP3A4P08684 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CYP3A4P08684 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.18■□□□□ 0.18
CYP3A4P08684 MIR3907-201ENST00000579424 151 ntBASIC16.18■□□□□ 0.18
CYP3A4P08684 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.18■□□□□ 0.18
CYP3A4P08684 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.18■□□□□ 0.18
CYP3A4P08684 AL606495.2-201ENST00000605867 535 ntBASIC16.18■□□□□ 0.18
CYP3A4P08684 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.18■□□□□ 0.18
CYP3A4P08684 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
CYP3A4P08684 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.18■□□□□ 0.18
CYP3A4P08684 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYP3A4P08684 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CYP3A4P08684 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CYP3A4P08684 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.17■□□□□ 0.18
CYP3A4P08684 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.17■□□□□ 0.18
CYP3A4P08684 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.17■□□□□ 0.18
CYP3A4P08684 HMGA1P1-201ENST00000415560 1062 ntBASIC16.17■□□□□ 0.18
CYP3A4P08684 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.17■□□□□ 0.18
CYP3A4P08684 RHOQP1-201ENST00000555758 579 ntBASIC16.17■□□□□ 0.18
CYP3A4P08684 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.17■□□□□ 0.18
CYP3A4P08684 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.17■□□□□ 0.18
CYP3A4P08684 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CYP3A4P08684 SIGLEC18P-201ENST00000602271 909 ntBASIC16.17■□□□□ 0.18
CYP3A4P08684 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CYP3A4P08684 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 AC005089.1-201ENST00000619486 2241 ntBASIC16.17■□□□□ 0.18
CYP3A4P08684 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYP3A4P08684 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.16■□□□□ 0.18
CYP3A4P08684 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYP3A4P08684 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CYP3A4P08684 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms