Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 AC011498.7-201ENST00000624986 2027 ntBASIC16.38■□□□□ 0.21
TPM3P06753 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.37■□□□□ 0.21
TPM3P06753 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.37■□□□□ 0.21
TPM3P06753 HLA-J-203ENST00000494367 1087 ntBASIC16.37■□□□□ 0.21
TPM3P06753 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 AC140878.1-201ENST00000565277 250 ntBASIC16.37■□□□□ 0.21
TPM3P06753 KRT18P8-201ENST00000581937 1246 ntBASIC16.37■□□□□ 0.21
TPM3P06753 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM3P06753 MRPL37P1-201ENST00000592451 1337 ntBASIC16.37■□□□□ 0.21
TPM3P06753 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM3P06753 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM3P06753 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TPM3P06753 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 AC009474.1-201ENST00000455096 1565 ntBASIC16.36■□□□□ 0.21
TPM3P06753 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TPM3P06753 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 AL391647.1-201ENST00000395664 511 ntBASIC16.36■□□□□ 0.21
TPM3P06753 RPSAP43-201ENST00000402237 625 ntBASIC16.36■□□□□ 0.21
TPM3P06753 UPF3AP3-201ENST00000420996 769 ntBASIC16.36■□□□□ 0.21
TPM3P06753 AC107890.1-201ENST00000422478 521 ntBASIC16.36■□□□□ 0.21
TPM3P06753 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 SNHG9-202ENST00000564014 471 ntBASIC16.36■□□□□ 0.21
TPM3P06753 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 Z92544.3-201ENST00000624747 417 ntBASIC16.36■□□□□ 0.21
TPM3P06753 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 AL365181.3-201ENST00000605886 3222 ntBASIC16.36■□□□□ 0.21
TPM3P06753 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms