Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 PYY2-201ENST00000315776 282 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 HIST2H2BA-201ENST00000412169 381 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 SCARNA12-201ENST00000459155 270 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 RN7SL788P-201ENST00000460504 316 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 SLC25A15P3-201ENST00000505530 290 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AC140113.1-201ENST00000603467 169 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 RN7SL736P-201ENST00000613111 269 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 MIR7845-201ENST00000618396 99 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AC005618.3-201ENST00000624928 458 ntBASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.51■□□□□ 0.23
SYNPO2Q9UMS6 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AC145285.5-201ENST00000562217 361 ntBASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 RN7SL470P-201ENST00000583069 259 ntBASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 MIR5572-201ENST00000583188 137 ntBASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AP000322.3-201ENST00000608665 388 ntBASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 AP003419.4-201ENST00000616071 517 ntBASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPO2Q9UMS6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms