Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC012508.2-201ENST00000567613 1472 ntBASIC17.03■□□□□ 0.32
TRIM47Q96LD4 AC007326.2-201ENST00000624224 7579 ntBASIC17.03■□□□□ 0.32
TRIM47Q96LD4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM47Q96LD4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 AL137783.1-201ENST00000623494 1896 ntBASIC17.02■□□□□ 0.32
TRIM47Q96LD4 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.02■□□□□ 0.32
TRIM47Q96LD4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 MIR6720-201ENST00000611664 98 ntBASIC17.02■□□□□ 0.32
TRIM47Q96LD4 AL132780.4-201ENST00000624870 1135 ntBASIC17.02■□□□□ 0.32
TRIM47Q96LD4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM47Q96LD4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM47Q96LD4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 FRMPD2B-201ENST00000431305 1347 ntBASIC17.01■□□□□ 0.31
TRIM47Q96LD4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms