Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC004899.1-201ENST00000424687 1714 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC010141.1-201ENST00000411585 623 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 RN7SL11P-201ENST00000471305 293 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC245884.6-201ENST00000515672 1067 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC009955.4-201ENST00000597192 544 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 AL645939.5-201ENST00000606834 243 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC015967.2-201ENST00000624092 234 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 AC006435.4-201ENST00000625037 234 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 AL356737.1-201ENST00000634391 234 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 INE2-201ENST00000630399 1874 ntBASIC15.4■□□□□ 0.06
ATP2A3Q93084 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 RN7SL769P-201ENST00000469386 295 ntBASIC15.39■□□□□ 0.05
ATP2A3Q93084 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 AC105129.2-201ENST00000559536 390 ntBASIC15.39■□□□□ 0.05
ATP2A3Q93084 DUX4L46-201ENST00000566845 751 ntBASIC15.39■□□□□ 0.05
ATP2A3Q93084 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 AC026740.1-201ENST00000607068 791 ntBASIC15.39■□□□□ 0.05
ATP2A3Q93084 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 AL031595.1-201ENST00000623969 4709 ntBASIC15.39■□□□□ 0.05
ATP2A3Q93084 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP2A3Q93084 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
ATP2A3Q93084 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms