Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 MIR326-201ENST00000362220 95 ntBASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 ST13P19-201ENST00000442505 1124 ntBASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 KRT90P-201ENST00000549264 1064 ntBASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 ZACNP1-201ENST00000612259 710 ntBASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 AL591163.1-201ENST00000641757 987 ntBASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 AL008718.2-201ENST00000609206 1313 ntBASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDKAL1Q5VV42 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 KRT8P4-201ENST00000509735 1454 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AC006001.1-201ENST00000325130 474 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AL157407.1-201ENST00000435784 904 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AC015936.2-201ENST00000593177 259 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AC008735.3-201ENST00000596646 500 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AC138951.2-201ENST00000623455 1161 ntBASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDKAL1Q5VV42 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 AL354989.2-201ENST00000435838 1540 ntBASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 AC098614.1-201ENST00000368528 745 ntBASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKAL1Q5VV42 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms