Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 AL157823.1-201ENST00000403727 628 ntBASIC16.97■□□□□ 0.31
CNTNAP1P78357 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 IGHV1-12-201ENST00000518307 205 ntBASIC16.97■□□□□ 0.31
CNTNAP1P78357 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 AC078814.4-201ENST00000546650 327 ntBASIC16.97■□□□□ 0.31
CNTNAP1P78357 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 AL021707.6-201ENST00000609212 491 ntBASIC16.97■□□□□ 0.31
CNTNAP1P78357 AC104506.1-201ENST00000609247 429 ntBASIC16.97■□□□□ 0.31
CNTNAP1P78357 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 CCT8L1P-201ENST00000465400 1674 ntBASIC16.97■□□□□ 0.31
CNTNAP1P78357 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP1P78357 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP1P78357 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 GGTLC4P-201ENST00000402176 664 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 PGAM1P11-201ENST00000416729 680 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 KRT18P4-201ENST00000422599 1288 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 PPP1R2P4-201ENST00000424051 595 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 AC104961.1-201ENST00000427605 771 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 CDCA4P4-201ENST00000435216 680 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 RN7SL564P-201ENST00000496309 250 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.96■□□□□ 0.31
CNTNAP1P78357 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNTNAP1P78357 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP1P78357 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP1P78357 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP1P78357 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP1P78357 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 ASS1P2-201ENST00000439895 1223 ntBASIC16.95■□□□□ 0.3
CNTNAP1P78357 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 RN7SL147P-201ENST00000487345 298 ntBASIC16.95■□□□□ 0.3
CNTNAP1P78357 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.95■□□□□ 0.3
CNTNAP1P78357 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 KLF17P1-201ENST00000547105 1126 ntBASIC16.95■□□□□ 0.3
CNTNAP1P78357 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP1P78357 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP1P78357 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms