Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SEC61A1P61619 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 MIR1909-201ENST00000411312 80 ntBASIC12.86□□□□□ -0.35
SEC61A1P61619 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 AC234783.1-201ENST00000441761 496 ntBASIC12.86□□□□□ -0.35
SEC61A1P61619 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.86□□□□□ -0.35
SEC61A1P61619 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 TMEM198B-204ENST00000484016 896 ntBASIC12.86□□□□□ -0.35
SEC61A1P61619 AC068587.3-201ENST00000526613 355 ntBASIC12.86□□□□□ -0.35
SEC61A1P61619 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.86□□□□□ -0.35
SEC61A1P61619 ENPP7P5-201ENST00000541031 1031 ntBASIC12.86□□□□□ -0.35
SEC61A1P61619 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.86□□□□□ -0.35
SEC61A1P61619 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.86□□□□□ -0.35
SEC61A1P61619 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 AC055811.4-201ENST00000624039 1754 ntBASIC12.86□□□□□ -0.35
SEC61A1P61619 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
SEC61A1P61619 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.86□□□□□ -0.35
SEC61A1P61619 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SEC61A1P61619 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.85□□□□□ -0.35
SEC61A1P61619 MIR658-201ENST00000385210 100 ntBASIC12.85□□□□□ -0.35
SEC61A1P61619 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 AC007274.1-201ENST00000439805 662 ntBASIC12.85□□□□□ -0.35
SEC61A1P61619 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.85□□□□□ -0.35
SEC61A1P61619 AC093433.1-201ENST00000458048 571 ntBASIC12.85□□□□□ -0.35
SEC61A1P61619 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 GAPDHP40-201ENST00000505218 1006 ntBASIC12.85□□□□□ -0.35
SEC61A1P61619 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.85□□□□□ -0.35
SEC61A1P61619 PTP4A1P2-201ENST00000546033 454 ntBASIC12.85□□□□□ -0.35
SEC61A1P61619 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC61A1P61619 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
SEC61A1P61619 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms