Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT6CP48668 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT6CP48668 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6CP48668 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6CP48668 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6CP48668 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT6CP48668 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KRT6CP48668 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6CP48668 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6CP48668 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT6CP48668 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KRT6CP48668 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 HSPA8P5-201ENST00000456928 2069 ntBASIC14.18□□□□□ -0.14
KRT6CP48668 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KRT6CP48668 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT6CP48668 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.18□□□□□ -0.14
KRT6CP48668 RNA5SP486-201ENST00000515961 83 ntBASIC14.18□□□□□ -0.14
KRT6CP48668 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT6CP48668 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.18□□□□□ -0.14
KRT6CP48668 ECM1P1-201ENST00000604092 1279 ntBASIC14.18□□□□□ -0.14
KRT6CP48668 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.18□□□□□ -0.14
KRT6CP48668 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6CP48668 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6CP48668 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KRT6CP48668 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KRT6CP48668 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KRT6CP48668 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KRT6CP48668 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
KRT6CP48668 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
KRT6CP48668 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.17□□□□□ -0.14
KRT6CP48668 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.17□□□□□ -0.14
KRT6CP48668 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 ARSEP1-201ENST00000420443 635 ntBASIC14.17□□□□□ -0.14
KRT6CP48668 FAM8A4P-201ENST00000435433 1213 ntBASIC14.17□□□□□ -0.14
KRT6CP48668 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KRT6CP48668 GNRHR2-203ENST00000581100 1187 ntBASIC14.17□□□□□ -0.14
KRT6CP48668 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.17□□□□□ -0.14
KRT6CP48668 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.17□□□□□ -0.14
KRT6CP48668 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.17□□□□□ -0.14
KRT6CP48668 DGCR9-201ENST00000609630 2415 ntBASIC14.17□□□□□ -0.14
KRT6CP48668 AC009093.2-202ENST00000620513 2079 ntBASIC14.17□□□□□ -0.14
KRT6CP48668 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6CP48668 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6CP48668 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms