Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.33■□□□□ 0.04
GRIK1P39086 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GRIK1P39086 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIK1P39086 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
GRIK1P39086 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIK1P39086 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIK1P39086 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIK1P39086 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIK1P39086 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIK1P39086 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GRIK1P39086 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
GRIK1P39086 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GRIK1P39086 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIK1P39086 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIK1P39086 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 RN7SL720P-201ENST00000488178 304 ntBASIC15.32■□□□□ 0.04
GRIK1P39086 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 POU5F1P2-201ENST00000521750 823 ntBASIC15.32■□□□□ 0.04
GRIK1P39086 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 CHMP4BP1-201ENST00000556017 588 ntBASIC15.32■□□□□ 0.04
GRIK1P39086 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 AC005586.2-201ENST00000563946 837 ntBASIC15.32■□□□□ 0.04
GRIK1P39086 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIK1P39086 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.32■□□□□ 0.04
GRIK1P39086 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GRIK1P39086 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 C8orf49-201ENST00000525043 1968 ntBASIC15.32■□□□□ 0.04
GRIK1P39086 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
GRIK1P39086 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIK1P39086 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIK1P39086 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GRIK1P39086 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GRIK1P39086 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 AC106881.1-201ENST00000605849 3329 ntBASIC15.31■□□□□ 0.04
GRIK1P39086 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIK1P39086 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 OR2R1P-201ENST00000441404 914 ntBASIC15.31■□□□□ 0.04
GRIK1P39086 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.31■□□□□ 0.04
GRIK1P39086 IMP3P2-201ENST00000489760 475 ntBASIC15.31■□□□□ 0.04
GRIK1P39086 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIK1P39086 FGFR3P5-201ENST00000564496 886 ntBASIC15.31■□□□□ 0.04
GRIK1P39086 RN7SL574P-201ENST00000581512 297 ntBASIC15.31■□□□□ 0.04
GRIK1P39086 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIK1P39086 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GRIK1P39086 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIK1P39086 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms