Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
THBS1P07996 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.44□□□□□ -0.26
THBS1P07996 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 CHMP1AP1-201ENST00000445563 662 ntBASIC13.44□□□□□ -0.26
THBS1P07996 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.44□□□□□ -0.26
THBS1P07996 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.44□□□□□ -0.26
THBS1P07996 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.44□□□□□ -0.26
THBS1P07996 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
THBS1P07996 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
THBS1P07996 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
THBS1P07996 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
THBS1P07996 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
THBS1P07996 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
THBS1P07996 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 USP17L6P-201ENST00000382470 1197 ntBASIC13.43□□□□□ -0.26
THBS1P07996 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 AL035696.2-201ENST00000407941 709 ntBASIC13.43□□□□□ -0.26
THBS1P07996 MIR1202-201ENST00000408529 83 ntBASIC13.43□□□□□ -0.26
THBS1P07996 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.43□□□□□ -0.26
THBS1P07996 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.43□□□□□ -0.26
THBS1P07996 AC092473.1-201ENST00000441098 221 ntBASIC13.43□□□□□ -0.26
THBS1P07996 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 AP000812.2-201ENST00000538934 718 ntBASIC13.43□□□□□ -0.26
THBS1P07996 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
THBS1P07996 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.43□□□□□ -0.26
THBS1P07996 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms