Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 EEF1DP6-201ENST00000449232 372 ntBASIC13.69□□□□□ -0.22
CTSBP07858 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 AL353637.1-201ENST00000451571 732 ntBASIC13.69□□□□□ -0.22
CTSBP07858 AC234782.1-201ENST00000451950 919 ntBASIC13.69□□□□□ -0.22
CTSBP07858 DUX4L50-201ENST00000455245 715 ntBASIC13.69□□□□□ -0.22
CTSBP07858 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 RN7SL67P-201ENST00000492147 296 ntBASIC13.69□□□□□ -0.22
CTSBP07858 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.69□□□□□ -0.22
CTSBP07858 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 PRKXP1-201ENST00000561423 1122 ntBASIC13.69□□□□□ -0.22
CTSBP07858 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.69□□□□□ -0.22
CTSBP07858 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.69□□□□□ -0.22
CTSBP07858 MIR3677-201ENST00000578964 60 ntBASIC13.69□□□□□ -0.22
CTSBP07858 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CTSBP07858 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 AC021016.3-201ENST00000608367 477 ntBASIC13.69□□□□□ -0.22
CTSBP07858 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.69□□□□□ -0.22
CTSBP07858 AC006453.1-201ENST00000636037 1257 ntBASIC13.69□□□□□ -0.22
CTSBP07858 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.69□□□□□ -0.22
CTSBP07858 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSBP07858 LINC01230-201ENST00000625222 3017 ntBASIC13.69□□□□□ -0.22
CTSBP07858 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSBP07858 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CTSBP07858 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CTSBP07858 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.68□□□□□ -0.22
CTSBP07858 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 BANF1P3-201ENST00000412556 261 ntBASIC13.68□□□□□ -0.22
CTSBP07858 OR8T1P-201ENST00000421347 918 ntBASIC13.68□□□□□ -0.22
CTSBP07858 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSBP07858 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSBP07858 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSBP07858 AC093752.3-201ENST00000567343 901 ntBASIC13.68□□□□□ -0.22
CTSBP07858 LINC01783-202ENST00000614408 828 ntBASIC13.68□□□□□ -0.22
CTSBP07858 BX284668.2-205ENST00000619677 828 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms