Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.27■□□□□ 0.04
C1RP00736 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.27■□□□□ 0.04
C1RP00736 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.27■□□□□ 0.04
C1RP00736 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C1RP00736 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C1RP00736 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.27■□□□□ 0.04
C1RP00736 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1RP00736 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C1RP00736 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.27■□□□□ 0.04
C1RP00736 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.27■□□□□ 0.04
C1RP00736 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.27■□□□□ 0.04
C1RP00736 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.27■□□□□ 0.04
C1RP00736 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.27■□□□□ 0.03
C1RP00736 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
C1RP00736 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.27■□□□□ 0.03
C1RP00736 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C1RP00736 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C1RP00736 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
C1RP00736 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.26■□□□□ 0.03
C1RP00736 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C1RP00736 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.26■□□□□ 0.03
C1RP00736 AC018638.5-201ENST00000450885 754 ntBASIC15.26■□□□□ 0.03
C1RP00736 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.26■□□□□ 0.03
C1RP00736 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C1RP00736 TMCO5B-205ENST00000530020 894 ntBASIC15.26■□□□□ 0.03
C1RP00736 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.26■□□□□ 0.03
C1RP00736 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.26■□□□□ 0.03
C1RP00736 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.26■□□□□ 0.03
C1RP00736 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.26■□□□□ 0.03
C1RP00736 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C1RP00736 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C1RP00736 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.26■□□□□ 0.03
C1RP00736 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 AC106881.1-201ENST00000605849 3329 ntBASIC15.26■□□□□ 0.03
C1RP00736 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1RP00736 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
C1RP00736 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.25■□□□□ 0.03
C1RP00736 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.25■□□□□ 0.03
C1RP00736 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
C1RP00736 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 AP002353.1-201ENST00000528257 1599 ntBASIC15.25■□□□□ 0.03
C1RP00736 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
C1RP00736 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
C1RP00736 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.25■□□□□ 0.03
C1RP00736 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 KRT17P5-201ENST00000332088 839 ntBASIC15.25■□□□□ 0.03
C1RP00736 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1RP00736 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms