Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHL1O00533 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHL1O00533 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHL1O00533 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHL1O00533 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHL1O00533 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.45■□□□□ 0.54
CHL1O00533 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.45■□□□□ 0.54
CHL1O00533 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.45■□□□□ 0.54
CHL1O00533 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.45■□□□□ 0.54
CHL1O00533 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.45■□□□□ 0.54
CHL1O00533 RN7SL455P-201ENST00000580629 282 ntBASIC18.45■□□□□ 0.54
CHL1O00533 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHL1O00533 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.45■□□□□ 0.54
CHL1O00533 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.45■□□□□ 0.54
CHL1O00533 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.45■□□□□ 0.54
CHL1O00533 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CHL1O00533 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.45■□□□□ 0.54
CHL1O00533 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.45■□□□□ 0.54
CHL1O00533 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHL1O00533 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
CHL1O00533 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHL1O00533 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHL1O00533 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.44■□□□□ 0.54
CHL1O00533 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.44■□□□□ 0.54
CHL1O00533 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHL1O00533 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CHL1O00533 AC027601.5-201ENST00000624065 2482 ntBASIC18.44■□□□□ 0.54
CHL1O00533 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.44■□□□□ 0.54
CHL1O00533 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CHL1O00533 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.44■□□□□ 0.54
CHL1O00533 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.44■□□□□ 0.54
CHL1O00533 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.44■□□□□ 0.54
CHL1O00533 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.44■□□□□ 0.54
CHL1O00533 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.44■□□□□ 0.54
CHL1O00533 MIR4522-201ENST00000584932 87 ntBASIC18.44■□□□□ 0.54
CHL1O00533 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.44■□□□□ 0.54
CHL1O00533 AC103810.10-201ENST00000606504 343 ntBASIC18.44■□□□□ 0.54
CHL1O00533 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHL1O00533 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.44■□□□□ 0.54
CHL1O00533 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC18.44■□□□□ 0.54
CHL1O00533 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CHL1O00533 TCAM1P-207ENST00000485295 1537 ntBASIC18.44■□□□□ 0.54
CHL1O00533 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHL1O00533 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.43■□□□□ 0.54
CHL1O00533 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
CHL1O00533 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.43■□□□□ 0.54
CHL1O00533 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.43■□□□□ 0.54
CHL1O00533 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHL1O00533 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHL1O00533 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms