Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AP002353.1-201ENST00000528257 1599 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AL591122.2-201ENST00000624125 1853 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 AL136379.1-201ENST00000623471 2642 ntBASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 CICP11-201ENST00000434745 2827 ntBASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
C1QTNF9BB2RNN3 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 OR7E115P-201ENST00000382617 1024 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 BX088651.3-201ENST00000418155 352 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 RBPMSLP-201ENST00000433427 502 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 MTND2P7-201ENST00000521337 640 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AL591424.3-201ENST00000614278 872 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C1QTNF9BB2RNN3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms