Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 MIR4326-201ENST00000582203 59 ntBASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 AC008536.3-201ENST00000623282 1599 ntBASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 AL590824.1-201ENST00000403828 1349 ntBASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 FAM226B-201ENST00000602508 1490 ntBASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDC42BPBQ9Y5S2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 MIR1307-201ENST00000408840 149 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 PHBP10-201ENST00000416467 784 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 RPL18AP16-201ENST00000424057 531 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 AC133141.1-201ENST00000443015 339 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 VENTXP4-201ENST00000449029 958 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 FTLP5-201ENST00000586853 534 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 HSPA8P5-201ENST00000456928 2069 ntBASIC21.16■□□□□ 0.98
CDC42BPBQ9Y5S2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 SRP14-208ENST00000560773 468 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AC064850.1-201ENST00000413279 1398 ntBASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms