Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 POM121L14P-201ENST00000406100 1558 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 AC009474.1-201ENST00000455096 1565 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MCCD1P2-201ENST00000423228 335 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 GPS2P2-201ENST00000430745 888 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 SDHAP3-202ENST00000515467 728 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 AL512361.1-201ENST00000554200 418 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 C20orf181-201ENST00000623918 480 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 AC105339.1-204ENST00000636249 355 ntBASIC13.81□□□□□ -0.2
AP4S1Q9Y587 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.81□□□□□ -0.2
AP4S1Q9Y587 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms