Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RN7SL288P-201ENST00000490496 291 ntBASIC19.42■□□□□ 0.7
PHF8Q9UPP1 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 RN7SL556P-201ENST00000582856 298 ntBASIC19.42■□□□□ 0.7
PHF8Q9UPP1 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 AC138761.6-201ENST00000583997 1423 ntBASIC19.42■□□□□ 0.7
PHF8Q9UPP1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 PAUPAR-201ENST00000630360 2965 ntBASIC19.41■□□□□ 0.7
PHF8Q9UPP1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 GEMIN8P4-201ENST00000380526 729 ntBASIC19.41■□□□□ 0.7
PHF8Q9UPP1 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 AC023968.2-201ENST00000560593 1049 ntBASIC19.41■□□□□ 0.7
PHF8Q9UPP1 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF8Q9UPP1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 RPL3P5-201ENST00000441645 1232 ntBASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.4■□□□□ 0.7
PHF8Q9UPP1 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 ENPP7P8-202ENST00000527856 1345 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms