Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 MIR33B-201ENST00000385104 96 ntBASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 DUTP3-201ENST00000450025 415 ntBASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DENND2AQ9ULE3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC006480.2-201ENST00000609770 1337 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 MIR557-201ENST00000385239 98 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AL583805.1-201ENST00000391389 531 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 TPT1P11-201ENST00000458482 498 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 RN7SL277P-201ENST00000481521 288 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC114947.1-202ENST00000514136 344 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 MIR4706-201ENST00000582134 82 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC103810.10-201ENST00000606504 343 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 AC005912.2-201ENST00000619492 2400 ntBASIC17.52■□□□□ 0.4
DENND2AQ9ULE3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
DENND2AQ9ULE3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
DENND2AQ9ULE3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DENND2AQ9ULE3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
DENND2AQ9ULE3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
DENND2AQ9ULE3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
DENND2AQ9ULE3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC064801.2-201ENST00000625052 1303 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms