Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 ZNF890P-202ENST00000530367 1156 ntBASIC11.87□□□□□ -0.51
RAB40CQ96S21 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB40CQ96S21 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB40CQ96S21 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms