Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 AC012617.1-204ENST00000586340 2305 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 CD8B2-202ENST00000417670 633 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 CTBP2P5-201ENST00000454986 1264 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 AL590640.2-201ENST00000457038 527 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 AP000812.2-201ENST00000538934 718 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 HILS1-202ENST00000545329 423 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 RHOXF1P1-202ENST00000635473 501 ntBASIC13.84□□□□□ -0.19
COL21A1Q96P44 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.84□□□□□ -0.19
COL21A1Q96P44 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL21A1Q96P44 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.83□□□□□ -0.19
COL21A1Q96P44 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL21A1Q96P44 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.83□□□□□ -0.19
COL21A1Q96P44 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL21A1Q96P44 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
COL21A1Q96P44 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL21A1Q96P44 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL21A1Q96P44 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL21A1Q96P44 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
COL21A1Q96P44 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 MESTP3-201ENST00000503460 968 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 FTLP10-202ENST00000505798 471 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms