Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AL627223.1-201ENST00000416693 442 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AC026410.3-201ENST00000514280 936 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 MIR6080-201ENST00000617359 66 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 FAM197Y3-203ENST00000618346 717 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AL158212.4-201ENST00000624062 1286 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 ZNF259P1-201ENST00000407656 1365 ntBASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 MCCD1P2-201ENST00000423228 335 ntBASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 MKNK2P1-201ENST00000437526 628 ntBASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 C20orf181-201ENST00000623918 480 ntBASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SMIM4Q8WVI0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SMIM4Q8WVI0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms