Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 ECM1P1-201ENST00000604092 1279 ntBASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 KHSRPP1-201ENST00000427983 1768 ntBASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 AC111170.3-201ENST00000624282 2464 ntBASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 AL590640.2-201ENST00000457038 527 ntBASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 TCAM1P-207ENST00000485295 1537 ntBASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.05□□□□□ -0.16
CLHC1Q8NHS4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 LINC02486-201ENST00000604157 3000 ntBASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 MIR6074-201ENST00000612054 107 ntBASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms