Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NANOGP1Q8N7R0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 DNAJB3-201ENST00000446806 729 ntBASIC13□□□□□ -0.33
NANOGP1Q8N7R0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 RN7SL399P-201ENST00000471648 279 ntBASIC13□□□□□ -0.33
NANOGP1Q8N7R0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 AC104506.1-201ENST00000609247 429 ntBASIC13□□□□□ -0.33
NANOGP1Q8N7R0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13□□□□□ -0.33
NANOGP1Q8N7R0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
NANOGP1Q8N7R0 MEX3B-202ENST00000558133 4333 ntBASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 LINC02486-201ENST00000604157 3000 ntBASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 CES1P1-201ENST00000421606 1704 ntBASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 BTBD7P1-201ENST00000447253 1453 ntBASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NANOGP1Q8N7R0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms