Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.29■□□□□ 0.04
IRX4P78413 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.29■□□□□ 0.04
IRX4P78413 CHMP4BP1-201ENST00000556017 588 ntBASIC15.29■□□□□ 0.04
IRX4P78413 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 MIR4706-201ENST00000582134 82 ntBASIC15.29■□□□□ 0.04
IRX4P78413 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.29■□□□□ 0.04
IRX4P78413 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.29■□□□□ 0.04
IRX4P78413 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 AC138627.1-207ENST00000641560 1006 ntBASIC15.29■□□□□ 0.04
IRX4P78413 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 AC079781.5-202ENST00000641784 3743 ntBASIC15.29■□□□□ 0.04
IRX4P78413 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 AL731571.1-201ENST00000617058 5428 ntBASIC15.29■□□□□ 0.04
IRX4P78413 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 AL138799.1-201ENST00000448213 1675 ntBASIC15.28■□□□□ 0.04
IRX4P78413 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 AC006504.5-208ENST00000588784 2401 ntBASIC15.28■□□□□ 0.04
IRX4P78413 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IRX4P78413 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
IRX4P78413 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 KRT8P19-201ENST00000551916 1455 ntBASIC15.28■□□□□ 0.04
IRX4P78413 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.28■□□□□ 0.04
IRX4P78413 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 AC113367.3-201ENST00000508316 1912 ntBASIC15.28■□□□□ 0.04
IRX4P78413 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.28■□□□□ 0.04
IRX4P78413 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.28■□□□□ 0.04
IRX4P78413 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.28■□□□□ 0.04
IRX4P78413 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.28■□□□□ 0.04
IRX4P78413 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 NDUFV2P1-201ENST00000596415 907 ntBASIC15.28■□□□□ 0.04
IRX4P78413 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.28■□□□□ 0.04
IRX4P78413 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IRX4P78413 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.28■□□□□ 0.04
IRX4P78413 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IRX4P78413 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IRX4P78413 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.27■□□□□ 0.04
IRX4P78413 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms