Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 AL589987.1-201ENST00000453380 819 ntBASIC13.32□□□□□ -0.28
CXCR4P61073 AC067863.1-201ENST00000494933 530 ntBASIC13.32□□□□□ -0.28
CXCR4P61073 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.32□□□□□ -0.28
CXCR4P61073 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.32□□□□□ -0.28
CXCR4P61073 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.32□□□□□ -0.28
CXCR4P61073 AC036164.1-201ENST00000570544 333 ntBASIC13.32□□□□□ -0.28
CXCR4P61073 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CXCR4P61073 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 AC131212.3-201ENST00000624087 4219 ntBASIC13.31□□□□□ -0.28
CXCR4P61073 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CXCR4P61073 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.31□□□□□ -0.28
CXCR4P61073 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 FAM86LP-201ENST00000478302 853 ntBASIC13.31□□□□□ -0.28
CXCR4P61073 AC026410.3-201ENST00000514280 936 ntBASIC13.31□□□□□ -0.28
CXCR4P61073 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.31□□□□□ -0.28
CXCR4P61073 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.31□□□□□ -0.28
CXCR4P61073 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 AL049840.4-201ENST00000602422 811 ntBASIC13.31□□□□□ -0.28
CXCR4P61073 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CXCR4P61073 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CXCR4P61073 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.31□□□□□ -0.28
CXCR4P61073 AL118506.1-201ENST00000601296 3082 ntBASIC13.31□□□□□ -0.28
CXCR4P61073 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 AL139094.1-201ENST00000405549 1188 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.3□□□□□ -0.28
CXCR4P61073 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms