Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CKS1BP61024 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CKS1BP61024 AP3S2-216ENST00000617003 1561 ntBASIC10.34□□□□□ -0.75
CKS1BP61024 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.34□□□□□ -0.75
CKS1BP61024 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC10.34□□□□□ -0.75
CKS1BP61024 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CKS1BP61024 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.34□□□□□ -0.75
CKS1BP61024 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.34□□□□□ -0.75
CKS1BP61024 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CKS1BP61024 ACE3P-201ENST00000423435 1973 ntBASIC10.34□□□□□ -0.75
CKS1BP61024 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.34□□□□□ -0.75
CKS1BP61024 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CKS1BP61024 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
CKS1BP61024 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 HMGN1P19-201ENST00000436976 333 ntBASIC10.33□□□□□ -0.76
CKS1BP61024 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 AL592309.1-201ENST00000443127 649 ntBASIC10.33□□□□□ -0.76
CKS1BP61024 ACTG1P14-201ENST00000446382 1122 ntBASIC10.33□□□□□ -0.76
CKS1BP61024 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
CKS1BP61024 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 AC243562.1-201ENST00000560672 389 ntBASIC10.33□□□□□ -0.76
CKS1BP61024 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 RARRES2P9-201ENST00000565168 469 ntBASIC10.33□□□□□ -0.76
CKS1BP61024 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 AC092865.6-201ENST00000642101 219 ntBASIC10.33□□□□□ -0.76
CKS1BP61024 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
CKS1BP61024 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.33□□□□□ -0.76
CKS1BP61024 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CKS1BP61024 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.33□□□□□ -0.76
CKS1BP61024 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CKS1BP61024 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CKS1BP61024 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CKS1BP61024 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CKS1BP61024 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CKS1BP61024 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CKS1BP61024 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CKS1BP61024 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CKS1BP61024 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CKS1BP61024 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms